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程祝宽

个人简介 研究员,博士生导师 E-mail: chengzk@yzu.edu.cn 1987年获扬州大学农学系农学学士,1990年获扬州大学农学系作物遗传育种硕士,1999年获中国科学院遗传研究所理学博士,1999年至2002年在美国Wisconsin-Madison大学从事博士后研究。2002年10月来中科院遗传发育所工作,任创新研究组组长,研究员,博士生导师。同年入选中国科学院“百人计划”,终期考核优秀。2003年获国家杰出青年基金资助,担任过Chromosome Research、Frontiers in Plant Science、JGG、PLoS One等杂志编委。 主要研究方向——植物减数分裂的遗传调控机制    减数分裂是真核生物有性生殖过程中发生的核心事件,对于有性生殖有着极其重要的意义。一方面,减数分裂产生染色体数目减半的配子,它们通过雌雄配子受精结合,维系了亲代与子代之间染色体数目的恒定。另一方面,减数分裂过程中同源染色体的非姊妹染色单体间发生交换,以及非同源染色体间的自由组合,使得遗传物质在双亲之间充分交流,增加了杂交后代的遗传多样性,亦为自然或人工选择提供丰富的基础材料。   水稻是重要的粮食作物,同时也是单子叶植物分子生物学研究的模式生物。其基因组只有430 Mb,是粮食作物中最小的。加之成熟的遗传转化体系、相对完善的基因组信息以及适中的染色体大小和数目,水稻已日渐成为减数分裂研究的理想材料。到目前为止,我们以水稻为模式植物,克隆了30多个参与减数分裂起始、同源染色体配对、联会、重组、分离等关键事件的功能基因,初步构建了水稻减数分裂遗传调控的基因网络。与酵母、哺乳动物以及拟南芥相比,水稻减数分裂基因功能具有很强的保守性,但有些基因也会有明显的功能分化。例如水稻联会复合体横丝蛋白基因ZEP1,该基因突变导致重组频率显著提高,这与其它物种相比有很大差别。另外,水稻SDS基因参与了DSB的形成,而在拟南芥中SDS并不参与DSB的形成,说明物种之间减数分裂调控机制可能存在一定的差异。   对减数分裂调控机制研究的深入,便可能通过基因工程手段实现对减数分裂过程的遗传调控,更好地服务于育种实践。例如,通过增加重组频率,更容易打破遗传累赘,缩短育种周期,提高育种效率。随着基因编辑手段在减数分裂突变体创制中的应用,以及减数分裂相关蛋白生化功能研究的深入,结合超高分辨显微技术、活体成像技术、单细胞测序技术等,对减数分裂调控机制的解析将愈加深入,相应遗传工程应用也会更有成效。 出版专著 顾铭洪,程祝宽 (2020).《水稻起源、分化与细胞遗传》,科学出版社,第1-345页。 责任作者文章 1.        Yang H, Li YF, Cao YW, Shi WQ, Xie E, Mu N, Du GJ, Shen Y, Tang D, Cheng ZK (2022). Nitrogen nutrition contributes to plant fertility by affecting meiosis initiation. Nature Comm. 13: 485. 2.        Yang SY, Zhang C, Cao YW, Du GJ, Tang D, Li YF, Shen Y, Yu HX, Cheng ZK (2022). FIGNL1 inhibits non-homologous chromosome association and crossover formation. Front. Plant Sci. 13: 1220. 3.        Ren LJ, Zhao T, Zhao YZ, Du GJ, Yang SY, Mu N, Tang D, Shen Y, Li YF, Cheng ZK (2021). The E3 ubiquitin ligase DESYNAPSIS1 regulates synapsis and recombination in rice meiosis. Cell Rep. 37: 109941. 4.        Miao YJ, Shi WQ, Wang HJ, Xue ZH, You HL, Zhang FF, Du GJ, Tang D, Li YF, Shen Y, and Cheng ZK (2021). Replication protein A large subunit (RPA1a) limits chiasma formation during rice meiosis. Plant Physiol. 187: 1605-1618. 5.        Zhao TT, Ren LJ, Zhao YZ, You HL, Zhou Y, Tang D, Du G, Shen Y, Li YF, Cheng ZK (2021). Reproductive cells and peripheral parietal cells collaboratively participate in meiotic fate acquisition in rice anthers. Plant J. 108: 661-671. 6.         Shi WQ, Ji JH, Xue ZH, Zhang FF, Miao YJ, Yang H, Tang D, Du GJ, Li YF, Shen Y, Cheng ZK (2021). PRD1, a homologous recombination initiation factor, is involved in spindle assembly in rice meiosis. New Phytol 230: 585–600. 7.         Jiang PF, Lian B, Liu CZ, Fu ZY, Shen Y, Cheng ZK, Qi YJ (2020). 21-nt phasiRNAs direct target mRNA cleavage in rice male germ cells. Nat Commun 11: 5191 8.         Liu CZ, Shen Y, Qin BX, Wen H, Cheng J, Mao F, Shi WQ, Tang D, Du GJ, Li YF, Wu YF, Cheng ZK (2020). Oryza sativa RNA-dependent RNA polymerase 6 contributes to double-strand break formation in meiosis. Plant Cell 32: 3273-3289. 9.         Zhang FF, Shen Y, Miao CB, Cao YW, Shi WQ, Du GJ, Tang D, Li YF, Luo Q, Cheng ZK (2020). OsRAD51D promotes homologous pairing and recombination by preventing nonhomologous interactions in rice meiosis. New Phytol 227: 824-839. 10.      Li H, Liu Y, Qin H, Lin X, Tang D, Wu Z, Luo W, Shen Y, Dong F, Wang Y, Feng T, Wang L, Li L, Chen D, Zhang Y, Murray J, Chao D, Chong K, Cheng ZK, Meng Z (2020). A rice chloroplast-localized ABC transporter ARG1 modulates cobalt and nickel homeostasis and contributes to photosynthetic capacity. New Phytol 228: 163-178. 11.      Zhang FF, Ma LJ, Zhang C, Du G, Shen Y, Tang D, Li YF, Yu HX, Ma BJ, Cheng ZK (2020). The SUN domain proteins OsSUN1 and OsSUN2 play critical but partially redundant roles in meiosis. Plant Physiol 183: 1517-1530. 12.      Zhang C, Zhang FF, Cheng XJ, Liu K, Tang J, Li YF, Tang D, Cheng ZK, Yu HX (2020). OsATM safeguards accurate repair of meiotic double-strand breaks in rice. Plant Physiol 183: 1047-1057. 13.      Ren LJ, Zhao T, Zhang L, Du GJ, Shen Y, Tang D, Li YF, Luo Q, Cheng ZK (2020). Defective Microspore Development 1 is required for microspore cell integrity and pollen wall formation in rice. Plant J 103: 1446-1459. 14.    Xue ZH, Liu CZ, Shi WQ, Miao YJ, Shen Y, Tang D, Li YF, You AQ, Xu YY, Chong K, Cheng ZK (2019). OsMTOPVIB is required for meiotic bipolar spindle assembly. PNAS 116: 15967-15972. 15.    Xie E, Li YF, Tang D, Lv YL, Shen Y, Cheng ZK (2019). A strategy for generating rice apomixis by gene editing. J. Integr Plant Biol, 61: 911-916. 16.    Xu M, Tang D, Cheng XJ, Zhang J, Tang Y, Tao Q, Shi WQ, You AQ, Gu MH, Cheng ZK, Yu HX (2019). OsPINOID regulates stigma and ovule initiation through maintenance of the floral meristem by auxin signaling. Plant Physiol. 180: 952-965. 17.    Shi WQ, Tang D, Shen Y, Xue ZH, Zhang FF, Zhang C, Ren LJ, Liu CZ, Du GJ, Li YF, Yan CJ, Cheng ZK (2019). OsHOP2 regulates the maturation of crossovers by promoting homologous pairing and synapsis in rice meiosis. New Physiologist, 222: 805-819. 18.    Zhao TT, Ren LJ, Chen XJ, Yu HX, Liu CJ, Shen Y, Shi WQ, Tang D, Du GJ, Li YF, Ma BJ, Cheng ZK (2018). A type-B response regulator, LEPTO1, is essential for setting up leptotene status in rice meiosis. Plant Cell, 30:3024-3037. 19.    Shi WQ, Tang D, Shen Y, Xue ZH, Zhang FF, Zhang C, Ren LJ, Liu CZ, Du GJ, Li YF, Yan CJ, Cheng ZK (2019). OsHOP2 regulates the maturation of crossovers by promoting homologous pairing and synapsis in rice meiosis. New Phytologist, 222: 805-819. 20.    Zhang C, Shen Y, Tang D, Shi WQ, Zhang DM, Du GJ, Zhou YH, Liang GH, Li YF, Cheng ZK (2018). The zinc finger protein DCM1 is required for male meiotic cytokinesis by preserving callose in rice. PLoS Genet., 10: e1007769.  21.    Li YF, Qin BX, Shen Y, Zhang FF, Liu CZ, You HL, Du GJ, Tang D, Cheng ZK (2018). HEIP1 regulates crossover formation during meiosis in rice, PNAS, 2018, 115: 10810-10815. 22.    Liu CZ, Xue ZH, Tang D, Shen Y, Shi WQ, Ren LJ, Du GJ, Li YF, Cheng ZK (2018). Ornithine -aminotransferase is critical for floret development and seed setting through mediating nitrogen reutilization in rice, Plant J, 96: 842-854. 23.    Ren LJ, Tang D, Zhao TT, Zhang FF, Liu CZ, Xue ZH, Shi WQ, Du GJ, Shen Y, Li YF, Cheng ZK (2018). OsSPL regulates meiotic fate acquisition in rice. New Phytologist 218: 789–803. 24.    Wu ZG, Tang D, Liu K, Miao CB, Zhuo XX, Li YF, Tan XL, Sun MF, Luo Q, Cheng ZK (2018). Characterization of a new semi-dominant dwarf allele of SLR1 and its potential application in hybrid rice breeding. JXB. 69: 4703-4713. 25.    Wu ZG, Fang DM, Yang R, Gao F, An XY, Zhuo XX 1, Li YF, Yi CD, Zhang T, Liang CZ, Cui P, Cheng ZK, Luo Q (2018). De novo genome assembly of Oryza granulata reveals rapid genome expansion and adaptive evolution. Communications Biology 1: DOI:10.1038/s42003-018-0089-4. 26.    Hu Q, Zhang C, Xue ZH, Ma LJ, Liu W, Shen Y, Ma B, Cheng ZK (2018). OsRAD17 is required for meiotic double-strand break repair and plays a redundant role with OsZIP4 in synaptonemal complex assembly. Front. Plant Sci. 9:1236.  27.    Zhang F, Tang D, Shen Y, Xue ZH, Shi WQ, Ren LJ, Du GJ, Li Y, Cheng ZK (2017). The F-box protein ZYGO1 mediates bouquet formation to promote homologous pairing, synapsis, and recombination in rice meiosis. Plant Cell 29: 2597-2609. 28.    Hu Q, Li YF, Wang HJ, Shen Y, Zhang C, Du GJ, Tang D, Cheng ZK (2017). Meiotic chromosome association 1 interacts with TOP3a and regulates meiotic recombination in rice. Plant Cell 29: 1697-1708. 29.    Ji JH, Tang D, Shen Y, Xue ZH, Wang HJ, Shi WQ, Zhang C, Du GJ, Li YF, Cheng ZK (2016). P31comet, a member of the synaptonemal complex, participates in meiotic DSB formation in rice. PNAS 113: 10577-10582. 30.    Xin Q, Shen Y, Li X, Lu W, Wang X, Han X, Dong FM, Wan LL, Yang GS, Hong DF, Cheng ZK (2016). MS5 mediates early meiotic progression and its natural variants may have applications for hybrid production in Brassica napus. Plant Cell 25: 1263-1278.  31.    Wang HJ, Hu Q, Tang D, Liu XF, Du GJ, Shen Y, Li YF, Cheng ZK (2016). OsDMC1 is not required for homologous pairing in rice meiosis. Plant Physiol. 171: 230-41. 32.    Hu Q, Tang D, Wang HJ, Shen Y, Chen XJ, Ji JH, Du GJ, Li YF, Cheng ZK (2016). The exonuclease homolog OsRAD1 promotes accurate meiotic double-strand break repair by suppressing non-homologous end joining. Plant Physiol. 172: 1105-1116. 33.    Xue ZH, Li YF, Zhang L, Shi WQ, Zhang C, Feng MS, Zhang FF, Tang D, Yu HX, Gu MH, Cheng ZK (2016). OsMTOPVIB promotes meiotic DNA double-strand break formation in rice. Molecular Plant 9: 1535-1538. 34.    Liu XF, Li M, Liu K, Tang D, Sun MF, Li YF, Shen Y, Du GJ, Cheng ZK (2016). Semi-Rolled Leaf2 modulates rice leaf rolling by regulating abaxial side cell differentiation. JXB. 67: 2139-50. 35.    Yang R, Li YF, Su Y, Tang D, Luo Q, Cheng ZK (2016). A functional centromere lacking CentO sequences in a newly formed ring chromosome in rice. Journal of Genetics and Genomics. 43: 694-701. 36.    Li Y, Cheng ZK (2016). Fluorescence in situ hybridization on rice chromosomes. Methods in Molecular Biology, 1370: 105-112. 37.    Wu ZG, Ji JH, Tang D, Wang HJ, Shen Y, Shi WQ, Li YF, Tan XL, Cheng ZK, Luo Q (2015). SDS is essential for DSB formation in rice meiosis. Front. Plant Sci. 6: 21. 38.    Zhang BW, Wang M, Tang D, Li YF, Xu M, Gu MH, Cheng ZK, Yu HX (2015). XRCC3 is essential for faithful DSB repair and homologous recombination in rice meiosis. JXB. 66: 5713-5725. 39.    Che LX, Wang KJ, Tang D, Liu QQ, Chen XJ, Hu Q, Shen Y, Yu HX, Gu MH, Cheng ZK (2014). OsHUS1 facilitates accurate meiotic recombination in rice. PLoS Genet. 10: e1004405. 40.    Tang D, Miao CB, Li YF, Wang HJ, Liu XF, Yu HX, Cheng ZK (2014). OsRAD51C is essential for double-strand break repair in rice meiosis. Front. Plant Sci. 5:167. 41.    Luo Q, Li YF, Shen Y, Cheng ZK (2014). Ten years of gene discovery for meiotic event control in rice. Journal of Genetics and Genomics. 41:125-137. 42.    Zhang L, Tang D, Luo Q, Chen XJ, Wang HJ, Li YF, Cheng ZK (2014). Crossover formation during rice meiosis relies on interaction of OsMSH4 and OsMSH5. Genetics. 198: 1447-1456. 43.    Cheng ZK (2013). Analyzing meiotic chromosomes in rice. In Methods in Molecular Biology: Plant Meiosis 990: 125-134. 44.    Miao CB, Tang D, Zhang HG, Wang M, Tang SZ, Yu HX, Gu MH, Cheng ZK (2013). CRC1, a novel synaptonemal complex component, is essential for meiotic recombination initiation in rice. Plant Cell 25: 2998-3009.  45.    Ji JH, Tang D, Wang M, Li YF, Zhang L, Wang KJ, Li M, Cheng ZK (2013). MRE11 is required for homologous synapsis and DSB processing in rice meiosis. Chromosoma 122: 363–376.  46.    Wu XR, Tang D, Li M, Wang KJ, Cheng ZK (2013). Loose plant architecture 1, an INDETERMINATE domain protein involved in shoot gravitropism, regulates plant architecture in rice. Plant Physiology 161: 317-329.  47.    Luo Q, Tang D, Wang M, Luo WX, Zhang L, Qin BX, Shen Y, Wang KJ, Li YF, Cheng ZK (2013). The role of OsMSH5 in crossover formation during rice meiosis. Molecular Plant 6: 729-742.   48.    Wang M, Tang D, Luo Q, Jin Y, Shen Y, Wang KJ, Cheng ZK (2012). BRK1, a Bub1-related kinase, is essential for generating proper tension between homologous kinetochores at metaphase I of rice meiosis. Plant Cell.24: 4961-4973. 49.    Wang K, Wang M, Tang D, Shen Y, Hu Q, Miao C, Lu T, Cheng ZK (2012). The role of rice HEI10 in the formation of meiotic crossovers. PLoS Genet 8: e1002809. 50.    Hong LL, Tang D, Zhu KM, Wang KJ, Li M, Cheng ZK (2012). Somatic and reproductive cell development in rice anther is regulated by a putative gutaredoxin. Plant Cell 24: 577-588. 51.    Shen Y, Tang D, Wang KJ, Wang M, Huang J, Luo WX, Luo Q, Hong LL, Li M, Cheng ZK (2012). The role of ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis. Journal of Cell Science 125: 2581-2591. 52.    Ji JH, Tang D, Wang KJ, Wang M, Che LX, Li M, Cheng ZK (2012). OsCOM1 deficiency results in defective homologous recombination and in aberrant recombination between nonhomologous chromosomes in rice meiosis. The Plant Journal 72: 18-30.  53.    Hong LL, Tang D, Shen Y, Hu Q, Wang KJ, Li M, Lu TG, Cheng ZK (2012). MIL2 regulates early cell differentiation in the rice anther. New Phytologist 196: 402-413. 54.    Hong LL, Qian Q, Tang D, Wang KJ, Li M, Cheng ZK (2012). A mutation in the rice chalcone isomerase gene causes the golden hull and internode1 phenotype. Planta 236: 141-151. 55.    Shao T, Qian Q, Tang D, Chen J, Li M, Cheng ZK, Luo Q. (2012). A novel gene IBF1 is required for the inhibition of brown pigment deposition in rice hull furrows. Theor. Appl. Genet. 125: 381-390. 56.    Wang M, Tang D, Wang KJ, Shen Y, Qin BX, Miao CB, Li M, Cheng ZK (2011).OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis. The Plant Journal 67: 583-594. 57.    Shao T, Tang D, Wang KJ, Wang M, Che LX, Qin BX, Yu HX, Li M, Gu MH, Cheng ZK (2011). OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis. Plant Physiol. 156: 1386-1396. 58.    Qin BX, Tang D, Huang J, Li M, Wu XR, Lu LL, Wang KJ, Yu HX, Chen JM, Gu MH, Cheng ZK (2011). Rice OsGL1-1 is involved in leaf cuticular wax and cuticle membrane. Molecular Plant 4: 985-995. 59.    Li M, Tang D, Wang KJ, Wu XR, Lu LL, Yu HX, Gu MH, Yan CJ, Cheng ZK (2011).  Mutations in the F-box gene LARGER PANICLE improve the panicle architecture and enhance the grain yield in rice. Plant Biotechnology Journal 9: 2001-2012. 60.    Wang KJ, Wang M, Tang D, Shen Y, Qin BX, Li M, Cheng ZK (2011). PAIR3, an axis-associated protein, is essential for the recruitment of recombination elements onto meiotic chromosomes in rice. Mol. Biol. Cell 22: 12-19. 61.    Che LX, Tang D, Wang KJ, Wang M, Zhu KM, Yu HX, Gu MH, Cheng ZK (2011). OsAM1 is required for leptotene-zygotene transition in rice. Cell Research 21: 654-665. 62.    Yu HX, Wang M, Tang D, Wang KJ, Chen FL, Gong ZY, Gu MH, Cheng ZK (2010). OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice. Chromosoma 119: 625-636. 63.    Wang M, Wang KJ, Tang D, Wei CX, Li M, Shen Y, Chi ZC, Gu MH, Cheng ZK (2010). The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice. Plant Cell 22: 417-430. 64.    Wang KJ, Tang D, Hong LL, Xu WY, Huang J, Li M, Gu MH, Xue YB, Cheng ZK (2010). DEP and AFO regulate reproductive habit in rice. PLoS Genet. 6: e1000818. 65.    Zhu KM, Tang D, Yan CJ, Chi ZC, Yu HX, Chen JM, Liang JS, Gu MH, Cheng ZK (2010). ERECT PANICLE2 encodes a novel protein that regulates panicle erectness in indica rice. Genetics 184: 343-350. 66.    Hong LL, Qian Q, Zhu KM, Tang D, Huang ZJ, Gao L, Li M, Gu MH, Cheng ZK (2010). ELE restrains empty glumes from developing into lemmas. J. Genet. Genomics 37: 101-115. 67.    Huang J, Tang D, Shen Y, Qin BX, Hong LL, You AQ, Li M, Wang X, Yu HX, Gu M, Cheng ZK (2010). Activation of gibberellin 2-oxidase 6 decreases active gibberellin levels and creates a dominant semi-dwarf phenotype in rice (Oryza sativa L.). J. Genet. Genomics 37: 23-36. 68.    Wang KJ, Tang D, Wang M, Lu JF, Yu HX, Liu JF, Qian BX,Gong ZY, Wang X, Chen JM, Gu MH, Cheng ZK (2009). MER3 is required for normal meiotic crossover formation, but not for presynaptic alignment in rice. Journal of Cell Science 122: 2055-2063. 69.    Li M, Xiong GY, Li R, Cui JJ, Tang D, Zhang BC, Pauly M, Cheng ZK, Zhou YH (2009). Rice cellulose synthase-like D4 is essential for normal cell-wall biosynthesis and plant growth. The Plant Journal 60: 1055-1069. 70.    Huang J, Zhang KW, Shen Y, Huang ZJ, Li M, Tang D, Gu MH, Cheng ZK (2009). Identification of a high frequency transposon induced by tissue culture, nDaiZ, a member of the hAT family in rice. Genomics 93: 274-281. 71.    Zhang DF, Yang QY, Ding Y, Cao XF, Xue YB, Cheng ZK (2008). Cytological characterization of the tandem repetitive sequences and their methylation status in the Antirrhinum majus genome. Genomics 92: 107-114. 72.    Yu HX, Wang X, Gong ZY, Tang D, Gu MH, Cheng ZK (2008). Generating of rice OsCENH3-GFP transgenic plants and their genetic applications. Chinese Science Bulletin 53: 2981-2988. 73.    Cui JJ, Fan SC, Shao T, Huang ZJ, Zheng DL, Tang D, Li M, Qian Q, Cheng ZK (2007). Characterization and fine mapping of the ibf mutant in rice. J. Integr. Plant Biol. 49: 678-685. 74.    Tang XM, Bao WD, Zhang WL, Cheng ZK (2007). Identification of chromosomes from multiple rice genomes using a universal molecular cytogenetic marker system. J. Integr. Plant Biol. 49: 953-960. 75.    Zhang KW, Qian Q, Huang ZJ, Wang YQ, Li M, Hong LL, Zheng DL, Gu MH, Chu CC,  Cheng ZK (2006). GOLD HULL AND INTERNODE2 (GH2) encodes a primarily multifunctional cinnamyl-alcohol dehydrogenase (CAD) in Oryza sativa. Plant Physiol. 140: 972-983. 76.    Bao WD, Zhang WL, Yang QY, Zhang Y, Han B, Gu MH, Xue YB, Cheng ZK (2006). Diversity of centromeric repeats in two closely related wild rice species, O. officinalis and O. rhizomatis. Mol. Gen. Genomics 275: 421-430. 77.    Zhang WL, Yi CD, Bao WD, Liu B, Cui JJ, Yu HX, Cao XF, Gu MH, Liu M, Cheng ZK (2005). The transcribed 165bp CentO satellite is the major functional centromeric element in the wild rice species Oryza punctata. Plant Physilol. 139: 306-315. 78.    Zhang DF, Yang QY, Bao WD, Zhang Y, Han B, Xue YB, Cheng ZK (2005). Molecular cytogenetic characterization of the Antirrhinum majus genome. Genetics 169: 325-335. 共同作者文章 79.    Hou XR, Wang DP, Cheng ZK, Wang Y, Jiao YL (2022). A near-complete assembly of an Arabidopsis thaliana genome. Molecular Plant, doi.org/10.1016/j.molp.2022.05.014. 80.    Yu H, Lin T, Meng XB, Du HL, Zhang JK, Liu GF, Chen MJ, Jing YH, Kou LQ, Li XX, Gao Q, Liang Y, Liu XD, Fan ZL, Liang YT, Cheng ZK, Chen MS, Tian ZX, Wang YH, Chu CC, Zuo JR, Wan JM, Qian Q, Han B, Zuccolo A, Wing R A, Gao CX, Liang CZ, Li JY (2021). A route to de novo domestication of wild allotetraploid rice. Cell. 184: 1156-1170. 81.    Liu CL, Cao YW, Hua YF, Du GJ, Liu Q, Wei X, Sun TT, Lin JR, Wu MG, Cheng ZK, Wang KJ (2021). Concurrent Disruption of Genetic Interference and Increase of Genetic Recombination Frequency in Hybrid Rice Using CRISPR/Cas9. Front Plant Sci 12: 757152. 82.    Lin T, Xu X, Du HL, Fan XL, Chen QW, Hai CY, Zhou ZJ, Su X, Kou LQ, Gao Q, Deng LW, Jiang JS, You HL, Ma YH, Cheng ZK, Wang GD, Liang CZ, Zhang GM, Yu H, Li JY (2021). Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum. Sci China Life Sci doi: 10.1007/s11427-021-2033-2. 83.    Sun, L., Jing, Y., Liu, X., Li, Q., Xue, Z., Cheng, Z., Wang, D., He, H., and Qian, W. (2020). Heat stress-induced transposon activation correlates with 3D chromatin organization rearrangement in Arabidopsis. Nat Commun 11: 1886. 84.    Zhang W, Peng KX, Cui FB, Wang DL, Zhao JZ, Zhang YJ, Yu NN, Wang YY, Zeng DL, Wang YH, Cheng ZK, Zhang KW (2020). Cytokinin oxidase/dehydrogenase OsCKX11 coordinates source and sink relationship in rice by simultaneous regulation of leaf senescence and grain number. Plant Biot J, doi: 10.1111/pbi.13467 85.    Lin T, Xu X, Ruan J, Liu S, Wu S, Shao X, Wang X, Gan L, Qin B, Yang Y, Cheng ZK, Yang S, Zhang Z, Xiong G, Huang SW, Yu H, Li JY (2018). Genome analysis of Taraxacum kok-saghyz Rodin provides new insights into rubber biosynthesis, Natl Sci Rev 5: 78-87. 86.    Wang D, Qin BX, Li X, Tang D, Zhang YE, Cheng ZK, Xue YB (2016). Nucleolar DEAD-box RNA helicase TOGR1 regulates thermotolerant growth as a pre-rRNA chaperone in rice. PLoS Genetics. 12: e1005844. 87.    Zhang BW, Xu M, Bian SQ, Hou LL, Tang D, Li YF, Gu MH, Cheng ZK, Yu HX (2015). Global identification of genes specific for rice meiosis. PLoS One. 10: e0137399. 88.    Zhang J, Liu XQ, Li SY, Cheng ZK, Li CY (2014). The rice semi-dwarf mutant sd37, caused by a mutation in CYP96B4, plays an important role in the fine-tuning of plant growth. PLoS One. 9: e88068. 89.    Yang CH, Li DY, Liu X, Ji CJ, Hao LL, Zhao XF, Li XB, Chen CY, Cheng ZK, Zhu LH (2014). OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC Plant Biology. 14:158. 90.    The Tomato Genome Consortium (2012). The tomato genome sequence provides insights into fleshy fruit evolution. Nature 485: 635-641. 91.    Xu J, Sun XJ, Jing YD, Wang M, Liu K, Jian YL, Yang M, Cheng ZK, Yang CL (2012). MRG-1 is required for genomic integrity in Caenorhabditis elegans germ cells. Cell Research 22: 886-902. 92.    Xu CH, Cheng ZK, Yu WC (2012). Construction of rice minichromosomes by telomere mediated chromosomal truncation. The Plant Journal 70: 1070-1079. 93.    Li J, Jiang JF, Qian Q, Xu YY, Zhang C, Xiao J, Du C, Luo W, Zou GX, Chen ML, Huang YQ, Feng YQ, Cheng ZK, Yuan M, Chong K (2011). Mutation of rice BC12/GDD1, which encodes a kinesin-like protein that binds to a GA biosynthesis gene promoter, leads to dwarfism with impaired cell elongation. Plant Cell 23: 628-640. 94.    Wang GX, He QY, Liu F, Cheng ZK, Talbert PB, Jin WW (2011). Characterization of CENH3 proteins and centromere-associated DNA sequences in diploid and allotetraploid Brassica species. Chromosoma 120: 353-365. 95.    Gong ZY, Liu XX, Tang D, Yu HX, Yi CD, Cheng ZK, Gu MH (2011). Non-homologous chromosome pairing and crossover formation in haploid rice meiosis. Chromosoma 120: 47-60. 96.    Chai CL, Fang J, LiuY. Tong HN, Gong Y, Liu M, Wang YH, Qian Q. Cheng ZK, Chu CC (2011). ZEBRA2, encoding a carotenoid isomerase, is involved in photoprotection in rice. Plant Mol. Biol. 75: 211-221. 97.    Lu F, Ammiraju J.S.S., Sanyal A., Zhang SL, Song RT, Chen JF, Li GS, Sui Y, Song X, Cheng ZK, de Oliveira AC, Bennetzen JL, Jackson SA, Wing RA, Chen MS (2009). Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes. PNAS 106: 2071-2076. 98.    Gao DY, Gill N, Kim HR, Walling JG, Zhang WL, Fan CZ, Yu YS, Ma JX, Miguel PS, Jiang N, Cheng ZK, Wing RA, Jiang JM, Jackson SA (2009). A lineage-specific centromere retro-transposon in Oryza brachyantha. The Plant Journal 60: 820-831. 99.    Shang JJ, Tao Y, Chen XW, Zou Y, Lei CL, Wang J, Li XB, Zhao XF, Zhang MJ, Lu ZK, Xu JC, Cheng ZK, Wan JM, Zhu LH (2009). Identification of a new rice blast resistance gene, Pid3, by genome wide comparison of paired-nucleotide-bindingsite–Leucine-rich repeat genes and their pseudogene alleles between the two sequenced rice genomes. Genetics 182: 1303-1311. 100. Cheng XD, Zhang DF, Cheng ZK, Keller B, Ling HQ (2009). A new family of Ty1-copia-Like retrotransposons originated in the tomato genome by a recent horizontal transfer event. Genetics 181: 1183-1193. 101. Xue YB, Zhang YJ, Yang QY, Li Q, Cheng ZK, Dickinson, HG (2009). Genetic features of a pollen-part mutation suggest an inhibitory role for the Antirrhinum pollen self-incompatibility determinant. Plant Mol. Biol. 70: 499-509. 102. Mueller L. A., et al. (2009). A snapshot of the emerging tomato genome sequence. Plant Genome 2: 78-92. 103. Chen SH, Yang Y, Shi WW, Ji Q, He F, Zhang ZD, Cheng ZK, Liu XN, Xu ML (2008). Badh2, encoding betaine aldehyde dehydrogenase, inhibits the biosynthesis of 2-acetyl-1-pyrroline, a major component in rice fragrance. Plant Cell 20: 1850-1861. 104. Yan S, Yan CJ, Zeng XH, Yang YC, Fang YW, Tian CY, Sun YW, Cheng ZK, Gu MH (2008).  ROLLED LEAF 9, encoding a GARP protein, regulates the leaf abaxial cell fate in rice. Plant Mol. Biol. 68: 239-250. 105. Fang J, Chai CL, Qian Q, Li CL, Tang JY, Sun L, Huang ZJ, Guo XL, Sun CH, Liu M, Zhang Y, Lu QT, Wang YQ, Lu CM, Han B, Chen F, Cheng ZK, Chu CC (2008). Mutations of genes in synthesis of the carotenoid precursors of ABA lead to preharvest sprouting and photo-oxidation in rice. The Plant Journal 54: 177-189. 106. Ding Y, Wang X, Su L, Zhai JX, Cao SY, Zhang DF, Liu CY, Bi YP, Qian Q, Cheng ZK, Chu CC, Cao XF (2007). SDG714, a Histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice. Plant Cell 19: 9-22. 107. Yang QY, Zhang DF, Li Q, Cheng ZK, Xue YB (2007). Heterochromatic and genetic features are consistent with recombination suppression of the self-incompatibility locus in Antirrhinum. The Plant Journal 51: 140-151. 108. Tang YL, Wen XG, Lu QT, Yang ZP, Cheng ZK, Lu CM (2007). Heat stress induces an aggregation of the light-harvesting complex of photosystem II in spinach plants. Plant Physiol. 143: 629-638. 109. Jiang L, Zhang W, Xia Z, Jiang G, Qian Q, Li A, Cheng ZK, Zhu L, Mao L, Zhai W (2007). A paracentric inversion suppresses genetic recombination at the FON3 locus with breakpoints corresponding to sequence gaps on rice chromosome 11L. Mol. Gen. Genomics 277: 263-272. 110. Li L, Wang XF, Stolc V, Li XY, Zhang DF, Su N, Tongprasit W, Li SG, Cheng ZK, Wang J, Deng XW (2006). Genome-wide transcription analyses in rice using tiling microarrays. Nature Genetics 38: 124-129. 111. Wang Y, Tang XM, Cheng ZK, Mueller L, Giovannoni J, Tanksley SD (2006). Euchromatin and pericentromeric heterochromatin: Comparative composition in the tomato genome. Genetics 172: 2529-2540. 112. Ge CM, Cui X, Wang YH, Hu YX, Fu ZM, Zhang DF, Cheng ZK, Jiayang Li (2006). BUD2, encoding an S-adenosylmethionine decarboxylase, is required for Arabidopsis growth and development. Cell Research 16: 446-456. 113. Mueller L. A., et al. (2005). The tomato sequencing project, the first cornerstone of the international Solanaceae project (SOL). Comparative and Functional Genomics 6: 153–158. 114. Jiao YL, Jia PX, Wang XF, Su N, Yu SL, Zhang DF, Ma LG, Feng Q, Jin ZQ, Li L, Xue YB, Cheng ZK, Zhao HY, Han B, Deng XW (2005). A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription. Plant Cell 17: 1641-1657. 115. International Rice Genome Sequencing Project (2005). The map-based sequence of the rice genome. Nature. 463: 793-800. 116. Lee HR, Zhang WL, Langdon T, Jin WW, Yan HH, Cheng ZK, Jiang JM (2005). ChIP cloning reveals rapid evolutionary patterns of centromeric DNA in Oryza species. PNAS 102: 11793-11798. 117. Nagaki K, Neumann P, Zhang DF, Ouyang S, Buell CR, Cheng ZK, Jiang JM (2005). Structure, divergence, and distribution of the CRR centromeric retrotransposon family in rice. Molecular Biology and Evolution 22: 845-855. 118. Guyot R, Cheng XD, Su Y, Cheng ZK, Schlagenhauf E, Keller B, Ling HQ (2005). Complex organization and evolution of the tomato, pericentromeric region at the FER gene locus1. Plant Physilol. 138: 1205-1215. 119. Nagaki K, Cheng ZK, Ouyang S, Talbert PB, Kim M, Jones KM, Henikoff S, Buell CR, Jiang JM (2004). Sequencing of a rice centromere uncovers active genes. Nature Genet. 36: 138-145. 120. Zhang Y, Huang YC, Zhang L, Li Y, Lu TT, Lu YQ, Feng Q, Zhao Q, Cheng ZK, Xue YB, Rod A. Wing, Han B (2004). Structural features of the rice chromosome 4 centromere. Nucleic Acids Research 32: 2023-2030. 121. Yu YS et al., (2003). In-depth view of structure, activity, and evolution of rice chromosome 10. Science 300: 1566-1569. 122. Liu DF, Cheng ZK, Liu GQ, Liu GZ, Wang Y, Zhao XF, Zhu LH (2003). Characterization and mapping of a lesion mimic mutant in rice (Oryza sativa L.), Chinese Science Bulletin 48: 892-896. 123. Sasaki T, Matsumoto T, Yamamoto K, Sakata K, Baba T, Katayose Y, Wu JZ, Niimura Y, Cheng ZK et al. (2002). The genome sequence and structure of rice chromosome 1. Nature. 420: 312-315. 124. Feng Q et al. (2002). Sequence and analysis of rice chromosome 4. Nature. 420: 316-320. 125. Cheng ZK, Dong FG, Langdon T, Shu OY, Buell CR, Gu MH, Blattner FR, Jiang JM (2002), Rice Centromeres are Marked by a Satellite Repeat and a Centromere-Specific Retrotransposon, Plant Cell 14: 1691-1704. 126. Zhao Q*, Zhang Y*, Cheng ZK*, Chen MS*, Wang SY, Feng Q, Huang YC, Li Y, Tang YS, Zhou B, Chen ZH, Yu SL, Zhu JJ, Hu X, Mu J, Ying K, Hao P, Zhang L, Lu YQ, Zhang LS, Liu YL, Yu Z, Fan DL, Weng QJ, Chen L, Lu TT, Liu XH, Jia PX, Sun TG, Wu YR, Zhang YJ, Lu Y, Li C, Wang R, Lei HY, Li T, Hu H, Wu M, Zhang RQ, Guan JP, Zhu J, Fu G, Gu MH, Hong GF, Xue YB, Wing R, Jiang JM, Han B (2002), A physical map of rice chromosome 4. Genome Research 12(4): 817-823. 127. Stupar RM, Song JQ, Tek AL, Cheng ZK, Dong FG, Jiang JM (2002), Amplification of rDNA IGS sequences resulted in highly condensed pericentric heterochromatin in potato: Implications on the origin and evolution of heterochromatic DNA. Genetics 162: 1435-1444. 128. Yuan QP, Hill J, Hsiao J, Moffat K, Ouyang S, Cheng ZK, Jiang JM, Buell CR (2002). Genome sequencing of a 239-kb region of rice chromosome 10L reveals a high frequency of gene duplication and a large chloroplast DNA insertion. Mol Genet Genomics 267: 713-720. 129. Cheng ZK, C. Robin Buell, Rod A. Wing, Gu MH, Jiang JM (2001). Toward a cytological characterization of the rice genome. Genome Research 11: 2133-2141. 130. Cheng ZK, Buell CR, Wing RA, Jiang JM (2002), Resolution of fluorescence in situ hybridization mapping on rice mitotic prometaphase chromosomes, meiotic pachytene chromosomes and extended DNA fibers. Chromosome Research 10: 379-387. 131. Jiang N, Bao Z, Temnykh S, Cheng ZK, Jiang J, Wing RA, McCouch SR, Wessler SR (2002), Dasheng: A recently amplified nonautonomous LTR element that is a major component of pericentromeric regions in rice, Genetics 161: 1293-1305. 132. Yan HH, Liu GQ, Cheng ZK, Li XB, Liu GZ, Min SK, Zhu LH (2002). A genome specific repetitive DNA sequence from Oryza eichingeri: characterization, localization, and introgression to O. sativa. Theor Appl Genet 104: 177-183.   133. Stupar RM, Lilly JW, Town CD, Cheng ZK, Kaul S, Buell CR, Jiang JM (2001). Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats. Proc Natl Acad Sci USA 98: 5099-5103. 134. Cheng ZK, Presting GG, Buell CR, Wing RA, Jiang JM (2001). High-resolution pachytene chromosome mapping of bacterial artificial chromosomes anchored by genetic markers reveals the centromere location and the distribution of genetic recombination along chromosome 10 of rice. Genetics 157: 1749-1757. 135. Cheng ZK, Yan HH, Yu HX, Tang SZ, Jiang JM, Gu MH and Zhu LH (2001). Development and applications of a complete set of rice telotrisomics. Genetics 157: 361-368. 136. Cheng ZK, Stupar RM, Gu MH and Jiang JM (2001). A tandemly repeated DNA element is associated with both knob-like heterochromatin and a highly decondensed looping structure in the meiotic pachytene chromosomes of rice. Chromosoma 110: 24-31. 137. Xu ML, Song JQ, Cheng ZK, Jiang JM, Korban SS (2001). A bacterial artificial chromosome (BAC) library of Malus floribunda 821 and contig construction for positional cloning of the apple scab resistance gene Vf. Genome 44: 1104-1113.  138. Yan HH, Liu GQ, Cheng ZK, Min SK, Zhu LH (2001). Characterization of euploid backcross progenies derived from interspecific hybrids between Oryza sativa and O. eichingeri by restriction fragment length polymorphism (RFLP) analysis and genomic in situ hybridization (GISH). Genome 44: 86-95. 139. Cheng ZK, Yu HX, Yan HH, Gu MH and Zhu LH (2000). B chromosome in a rice aneuploid variation. Theor Appl Genet 101: 564-568. 140. Jackson SA, Cheng ZK, Wang ML, Goodman HM and Jiang JM(2000). Comparative fluorescence in situ hybridization mapping of a 431-kb Arabidopsis thaliana bacterial artificial chromosome contig reveals the role of chromosomal duplications in the expansion of the Brassica rapa genome. Genetics 156: 833-838. 141. Cheng ZK, Yan HH, Yu HX, Qian Q, Yi CD, Gu MH, Zhu LH (2000). Fast assignment of DNA sequences to individual chromosome arms based on dosage effects from a set of rice telotrisomics, Acta Botanica Sinica 42: 708-711.   研究方向 社会兼职 暂无内容 暂无内容 教育经历 工作经历 1996.9-----1999.7 中国科学院研究生院 | 遗传学 | 博士研究生毕业 | 农学博士学位 暂无内容 团队成员 暂无内容 返回顶部 +130 程祝宽 个人信息 正高级 博士生导师 教师拼音名称:CZK 出生日期:1966-05-11 入职时间:2022-05-01 所在单位:农学院 学历:博士研究生毕业 性别:男 学位:农学博士学位 职称:正高级 在职信息:在岗 毕业院校:中国科学院研究生院 最后更新时间:2024-4-26   访问量:00006625 手机版 扬州大学官网 扬州大学 版权所有 苏ICP备 12022580号-1 地址:中国·江苏·扬州市大学南路88号 电话(TEL):86-0514-87991201 苏公网安备 32100302010246号