教师主页移动版

个人经历 personal experience 工作经历 教育经历 2023.06 - 至今，长聘副教授，西北工业大学生命学院2017.06 - 2023.06， 准聘副教授，西北工业大学生命学院2017-current, Associate professor (tenure), Northwestern Polytechnical University 2011-2017， 博士， 生物信息学， 美国普渡大学2006-2010， 本科， 园艺， 西北农林科技大学2011-2017, PhD, Bioinformatics, Purdue University (West Lafayette, IN, USA)2006-2010, B.S, Horticulture, Northwest A&F University (Yangling, Shaanxi, China)

教育教学

教育教学 Education and teaching 教育教学 招生信息 本科生课程 :生物专业英语（秋季学期）生物信息学（英）（秋季学期）生物统计学（英）（春季学期）研究生课程：生物信息学（春季学期）Undergraduate courses: English for Biology (Fall semester), Bioinformatics (Fall semester) Biostatistics (Spring semester)Graduate courses: Bioinformatics 硕士研究生招生专业生物学（071000）生物与医药（0860）Recruit Master students1. Biology2. Biology & Medicine

荣誉获奖

荣誉获奖 Awards Information 2023年9月，西北工业大学优秀班主任2019年10月，荣获“全国高校教师教学创新大赛---第五届外语微课大赛”，陕西赛区，三等奖2018年12月，荣获“西北工业大学生命学院青年教师讲课比赛”，一等奖

科学研究

科学研究 Scientific Research 生物信息学 (Bioinformatics)，下一代测序(Next-generation sequencing, NGS)，全基因组关联分析(Genome wide association study, GWAS)，数据可视化(data visualization)主持的科研项目 (Grants)1. 国家自然科学基金，青年项目：基于细胞核力学特性与三维基因组的巨噬细胞微重力响应机制研究，2019.01-2021.12，结题2. 国家自然科学基金，应急项目：基于数字全息显微术的免疫细胞微重力响应机制研究，2018.01-2018.12，结题3. 中国博士后基金，面上项目： 基于染色质构象捕获技术的免疫细胞微重力响应机制研究，2018.03-2019.12，结题4. 陕西省自然科学基金，青年项目：基于微悬臂梁免疫传感器的微生物快速检测技术研究，2018.01-2019.12，结题Grants1. National Natural Science Foundation of China, No.31741044, 2019.01-2021.12, PI2. National Natural Science Foundation of China, No.31800781, 2018.01-2018.12, PI3. China Postdoctoral Science Foundation, No. 2018M631198, 2018.03-2019.12, PI4. Natural Science Basic Research Program of Shaanxi province, 2018JQ1012, 2018.01-2019.12, PI 指导的项目1. 省级大学生创新训练项目，基于三维基因组的免疫细胞微重力响应机制的研究，明超（2019级本科生），良好结题2. 省级大学生创新训练项目，基于染色质开放区测序的可视化分析模型研究，熊天泽（2020级本科生），优秀结题3. 省级大学生创新训练项目，白玫瑰个性化染色的研究，夏泽炎（2020级本科生），良好结题

学术成果

学术成果 Academic Achievements Publications (# co-first authors, * Corresponding authors)16. Shilong Zhang and Sufang Wang*. ATAC-DEA: a web-based ATAC-seq data differential peak and annotation analysis application. Journal of Computational Biology, (2023) online15. Sufang Wang, Mengjiao Li, Suna Cai, Wei Zhang*. Transcriptome analysis reveals the differential inflammatory effects between propofol and sevoflurane during lung cancer resection: a randomized pilot study. World Journal of Surgical Oncology, (2023) 21:814. Liheng Luo, Michael Gribskov, Sufang Wang*. Bibliometric review of ATAC-Seq and its application in gene expression. Briefings in Bioinformatics, (2022) 1-1313. 王素芳，张弩，石国琳，刘希汝，周一丹，田镇豪，杨慧*. 染色质开放区测序和转录组测序揭示模拟失重抑制巨噬细胞免疫功能机理，医用生物力学，(2021) 36: 33012. Sufang Wang#, Nu Zhang#, Jianglei Di, Wenjuan Zhao, Guolin Shi, Ruiheng Xie, Bohan Hu, Hui Yang*. Analysis of the effects of magnetic levitation to simulate microgravity environment on the Arp2/3 complex pathway in macrophage. Journal of Biological Physics, (2021) 47:323–33511. Wang X#, Yue Z#, Xu F#, Wang S, Hu X, Dai J*, Zhao G*. Coevolution of ribosomal RNA expansion segment 7L and assembly factor Noc2p specializes the ribosome biogenesis pathway between Saccharomyces cerevisiae and Candida albicans. Nucleic Acids Research, (2021) 49:4655-466710. Li Y, Di J, Wang K, Wang S, Zhao J*. Classification of cell morphology with quantitative phase microscopy and machine learning. Optics Express, (2020) 28:23916-239279. Sufang Wang*, Lei Wang, Letong Xu, Qianlong Liu. RNA- seq analysis reveals the negative effects of simulated microgravity on macrophage. Basic & Clinical Pharmacology & Toxicology, (2020) 127: 408. Sufang Wang*, Yu Zhang*, Congzhan Hu, Nu Zhang, Michael Gribskov, Hui Yang. Shiny-DEG: A web application to analyze and visualize differentially expressed genes in RNA-seq. Interdisciplinary Sciences Computational Life Sciences, (2020) 12: 349-3547. Jing Li#, Sufang Wang#, Yuhui Li#, Nu Zhang, Michael Gribskov, Xi Zhang, Min Lin, Dongyan Shao, Chen Zhang, Liangliang Dai, Chuanguang Qin, Xianglong Duan, Juntang Li, Feng Xu*, Hui Yang*. miRNA‐mediated macrophage behaviors responding to matrix stiffness and ox‐LDL. Journal of Cellular Physiology, (2020) 235:6139–6153.6. Sufang Wang, Wenjuan Zhao, Guolin Shi, Nu Zhang, Chen Zhang, Hui Yang*. The effect of short- and long-term simulated microgravity on immune cells. Molecular & Cellular Biomechanics, (2019) 16: 1005. Sufang Wang and Michael Gribskov*. Transcriptome analysis identifies metallothionein as biomarkers to predict recurrence in hepatocellular carcinoma. Molecular Genetics & Genomic Medicine, (2019) 7:e693.4. Hu J, Li Y, Pakpour S, Wang S, Pan Z, Liu J, Wei Q, She J, Cang H* and Zhang RX*. Dose effects of orally administered spirulina suspension on colonic microbiota in healthy mice. Frontiers in Cellular and Infection Microbiology, (2019) 9:243.3. 王素芳，赵文娟，石国琳，张弩，杨慧*. 数字全息显微术和转录组测序揭示模拟失重抑制巨噬细胞免疫功能机理，医用生物力学，(2018) 33:1222. Sufang Wang and Michael Gribskov*. Comprehensive evaluation of de novo transcriptome assembly programs and their effects on differential gene expression analysis. Bioinformatics, (2017) 33: 327-333.1. Sufang Wang, M Gribskov, T Hazbun, P Pascuzzi*. CellMiner Companion: an interactive web application to explore CellMiner NCI-60 data. Bioinformatics, (2016) 32: 2399-2401.

综合介绍